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Structural > Presentation

AISMIG
The web application AISMIG (An Interactive Server-side Molecule Image Generator) is a new way of molecule image generation.
ALINE
ALINE is a protein-sequence alignment editor for publication-quality alignments.
Bobscript
Robert Esnouf's extensions to MolScript (v 1.4) including color ramping.
Chimera
Chimera is an interactive molecular graphics program, which is the successor to UCSF Midas and MidasPlus.
Cn3D
Cn3D is a helper application for your web browser that allows you to view 3-dimensional structures from NCBI's Entrez retrieval service.
ConSurf Server
Identification of functional regions in proteins by surface-mapping of phylogenetic information.
DINO
DINO is a realtime 3D visualization program for structural biology data.
ESPript
ESPript (Easy Sequencing in Postscript) is a utility to generate a pretty PostScript output from aligned sequences.
GRASP
GRASP is a molecular visualization and analysis program. It is particularly useful for the display and manipulation of the surfaces of molecules and their electrostatic properties.
Insight II
Insight II provides a comprehensive, integrated molecular graphics environment for visualization, protein engineering, macromolecular simulations, homology modeling, and de novo ligand design, enabling researchers to gain early insights into the structure and function of their targets of interest.
Jmol
Jmol is a free, cross-platform, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.
KINEMAGE
A "kinemage" (kinetic image) is a scientific illustration presented as an interactive computer display.
KiNG
KiNG (Kinemage, Next Generation) is an interactive system for three-dimensional vector graphics.
LIGPLOT
LIGPLOT automatically generates diagrams of protein-ligand interactions from a PDB file.
MolProbity
Web service for all-atom contact and geometrical analysis of your model.
Molscript
MolScript is a program for displaying molecular 3D structures, such as proteins, in both schematic and detailed representations.
NUCPLOT
NUCPLOT generate schematic diagrams of protein-nucleic acid interactions from a given PDB file.
Protein Movie Generator
Protein Movie Generator (PMG) is a service that can generate pictures and movies of protein structures.
PyMOL
PyMOL is a molecular viewer with the ability to generate high-quality rendered images for publication or animations, as well as other common molecular graphics activities to support crystallography.
RasMol & OpenRasMol
RasMol is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules.
RasTop
RasTop is a molecular visualization software derived from Rasmol.
Raster3D
Raster3D is a set of tools for generating high quality raster images of proteins or other molecules.
Ribbons
The Ribbons software interactively displays molecular models, analyzes crystallographic results, and creates publication quality images.
SETOR
SETOR is designed to allow the display of secondary, tertiary and quaternary structures of protein and nucleic acid macromolecules, and to allow a wide variety of rendering models to be used.
SYBYL
SYBYL is a suite of computational informatics software designed to enhance the drug discovery workflows and decision-making of today's computational chemists and molecular modelers.
Symmetry Equivalent Molecules
A web based GUI to generate and visualize the macromolecules.
Topology Cartoon Server
This service allows you to submit a protein structure for calculation of the topology cartoon.
VMD
VMD (Visual Molecular Dynamics) is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.